之前的方法不适用于新版的R了，更新如下
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DESeq2")
之前的方法
source('http://bioconductor.org/biocLite.R')
1
biocLite(c("AER","Amelia","arrayImpute","arrayMissPattern","boot","ca","car","cat","coin","corrgram","corrperm","doBy","doParallel","effects","FactoMineR","FAiR","fCalendar","flexclust","forecast","foreach","foreign","gclus","ggplot2","glmPerm","gmodels","gplots","grid","gridExtra","gvlma","rhdf5","roxygen2","hexbin","HH","kernlab","knitr","Hmisc","kmi","lattice","lavaan","lcda","leaps","lmPerm","logregperm", "longitudinalData","lsa","ltm","lubridate","MASS","mlogit","multcomp","mvnmle","mvoutlier","NbClust","Nccdf","ncdf4", "nFactors","OpenMx","odfWeave","pastecs","party","poLCA","psych","pwr","qcc","randomLCA","randomForest", "R2wd","rattle","Rcmdr","reshape2","rg1","rgl","RJDBC","rms","robust","RODBC","rpart","ROracle", "rrcov","sampling","scatterplot3d","sem","SeqKnn","sm","vcd","vegan","VIM","xlsx","XML" ) )
2
biocLite(c("fpc","cluster","pvclust","mclust","pam","pamk","clara","hclust","agnes","diana","dbscan","DMwR","DMwR2","xts","TTR","quantmod","ROCR","gplots", "plotcluster","plot.hclust","cluster.stats","party","randomForest","rpartOrdinal","tree","hms","readr", "marginTree","maptree","survival","ctree","cforest","glm","predict","residuals","survfit","survdiff","coxph", "arules","DRM","apriori","drm","eclat","arulesSequences","cSPADE","timsac","ts","decomp","decompose","stl.tsr", "nlme","aov","anova","density","t.test","prop.test","anvova","lme","princomp","e1071","stringr","lubridate","plyr","dplyr","RSQLite","sqldf","jsonlite","yaml","Rcpp","Rcpp11", "data.table","zoo")) biocLite(c("rmarkdown","devtools","testthat","pipeR","sde","KernSmooth","stats4", "shiny","rcharts","caret","HMM","LARS","glmnet","reshape","scales","R.matlab", "ez","digest","colorspace","RColorBrewer","manipulate","scales","labeling", "proto","munsell","gtable","dichromat","mime","RCurl","bitops","lubridata","animation","rugarch","BLCOP","MICE"))
感谢
