Version:1.0StartHTML:0000000107EndHTML:0000001502StartFragment:0000000127EndFragment:0000001484

> summary(IIvsI_res)out of 41398 with nonzero total read count

adjusted p-value < 0.1

LFC > 0 (up)      : 24, 0.058%

LFC < 0 (down)    : 12, 0.029%

outliers [1]      : 261, 0.63%

low counts [2]    : 10185, 25%

(mean count < 0)

[1] see 'cooksCutoff' argument of ?results

[2] see 'independentFiltering' argument of ?results

Version:1.0StartHTML:0000000107EndHTML:0000001407StartFragment:0000000127EndFragment:0000001389

> summary(IIIvsI_res)out of 38544 with nonzero total read count

adjusted p-value < 0.1

LFC > 0 (up)      : 65, 0.17%

LFC < 0 (down)    : 37, 0.096%

outliers [1]      : 333, 0.86%

low counts [2]    : 15945, 41%

(mean count < 3)