InterProscan 是一个比较强大的核酸/蛋白序列注释程序。
使用命令入下：
sh /opt/interproscan-5.18-57.0/interproscan.sh -goterms -pa -t p -f tsv -i pep.fa -o output.tsv
tsv 输出格式如下：
Protein Accession (e.g. P51587)
Sequence MD5 digest (e.g. 14086411a2cdf1c4cba63020e1622579)
Sequence Length (e.g. 3418)
Analysis (e.g. Pfam / PRINTS / Gene3D)
Signature Accession (e.g. PF09103 / G3DSA:2.40.50.140)
Signature Description (e.g. BRCA2 repeat profile)
Start location
Stop location
Score - is the e-value (or score) of the match reported by member database method (e.g. 3.1E-52)
Status - is the status of the match (T: true)
Date - is the date of the run
(InterPro annotations - accession (e.g. IPR002093) - optional column; only displayed if -iprlookup option is switched on)
(InterPro annotations - description (e.g. BRCA2 repeat) - optional column; only displayed if -iprlookup option is switched on)
(GO annotations (e.g. GO:0005515) - optional column; only displayed if --goterms option is switched on)
(Pathways annotations (e.g. REACT_71) - optional column; only displayed if --pathways option is switched on)
1. 蛋白质接入号
2. 序列的 MD5 值
3. 序列长度
4. 不同分析方案
5. 签名号
6. 签名描述
7. 起始位置
8. 终止位置
9. 得分
10. 状态
11. 运行日期
12... 其他
很好，很强大的功能~
