可变剪切:
软件:
地址:http://rnaseq-mats.sourceforge.net/user_guide.htm
python rmats.py --b1 b1.txt --b2 b2.txt --gtf gtfFile --od outDir -t readType --nthread nthread --readLength readLength --tstat tstat [options]*
rMATS analyzes skipped exon (SE), alternative 5' splice site (A5SS), alternative 3' splice site (A3SS), mutually exclusive exons (MXE), and retained intron (RI) events.
主要筛选看: