dcm目录下是以.nii结尾的文件

举例：现在需要将dcm目录下得dada.nii文件，复制到以dada文件名下面，dada文件需要新建。

#!/bin/bash
#dcm目录
dcm_path="/home/mcbrain/sharefolder/time1/T1_1to210nii_co"
#nii目录
nii_path="/home/mcbrain/sharefolder/time1/haha"

ls $dcm_path |while read line;do
    mkdir -p ${nii_path}/${line%.*}#比如dada.nii，这{line%.*}表示dada
    #mv ${dcm_path}/$line/x*.nii.gz ${nii_path}/$line/
   # dcm2nii -z y -o "${nii_path}/$line/Dwi/" "${dcm_path}/$line/Dwi/"
    target_file=`ls ${dcm_path}/*.nii`
    mv ${target_file} ${nii_path}/${line%.*}/$line.nii
done

另外一版，只需要更改目录

#! /bin/bash
#dcm目录
dcm_path="/home/mcbrain/sharefolder/T1_4dnii_raw"
#nii目录
nii_path="/home/mcbrain/sharefolder/T1_4dnii_raw_separate"

ls $dcm_path |while read line;do
    mkdir -p ${nii_path}/${line%.*} #比如dada.nii，这{line%.*}表示dada
    #mv ${dcm_path}/$line/x*.nii.gz ${nii_path}/$line/
    #dcm2nii -z y -o "${nii_path}/$line/Dwi/" "${dcm_path}/$line/Dwi/"
    target_file=`ls ${dcm_path}/$line`
    cp -v ${target_file} ${nii_path}/${line%.*}/
done

复制

#! /bin/bash
#复制到同名的文件夹内
#dcm目录
dcm_path="/home/mcbrain/sharefolder/control/t1_oriented"
#nii目录
nii_path="/home/mcbrain/sharefolder/control/t1_nii_oriented"

ls $dcm_path |while read line;do
    mkdir -p ${nii_path}/${line%.*} #比如dada.nii，这{line%.*}表示dada
    #mv ${dcm_path}/$line/x*.nii.gz ${nii_path}/$line/
    #dcm2nii -z y -o "${nii_path}/$line/Dwi/" "${dcm_path}/$line/Dwi/"
    target_file=`ls ${dcm_path}/*.nii`
    cp -v ${target_file} ${nii_path}/${line%.*}/
done