2024-07-16 SenCID离线下载安装与计算

1.pip download git+https://github.com/JackieHanLab/SenCID.git

2.pip install --no-index --find-links=file:/data/chenhm/project/SenCID SenCID


ERROR: tensorflow 2.4.4 has requirement absl-py~=0.10, but you'll have absl-py 1.4.0 which is incompatible.
ERROR: tensorflow 2.4.4 has requirement h5py~=2.10.0, but you'll have h5py 3.1.0 which is incompatible.
ERROR: tensorflow 2.4.4 has requirement six~=1.15.0, but you'll have six 1.16.0 which is incompatible.

3.修改不兼容版本:
pip install h5py~=2.10.0
pip install 'absl-py>=0.11.0'

4.再次安装
pip install --no-index --find-links=file:/data/chenhm/project/SenCID SenCID

  1. 安装成功
    SenCID -h

6.linux界面计算SenCID
SenCID --filepath . --denoising t --fileclass txt --binarize t --save_tmps save_tmps

7.查看输出
output/

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