ACMG检验标准以及InterVar自动化实现:
https://qinqianshan.com/ngs/callvariant/acmg-intervar/
注:上面的网站将ACMG检验标准及InterVar将的内容非常全面、清晰。
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ACMG5类判型:
pathogenic
likely pathogenic
benign
likely benign
uncertain significance
引文1:
InterVar: Clinical Interpretation of Genetic Variants by the 2015 ACMG-AMP Guidelines
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5294755/
引文2:
Standards and Guidelines for the Interpretation of Sequence Variants: A Joint Consensus Recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4544753/
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网页版intervar:http://wintervar.wglab.org
Intervar需28个证据:18个自动注释,10个需人工补充。
Intervar自带注释库(库内容来自annovar的注释输出):
Intervar的前置软件annovar需要的库: