有用的网站：
大盘鸡
赞哥
亚磊
Quicl's Blog
Genome Size Estimation
Kmer分析
考题
- 软件下载地址：
a. vcftools
使用：wget https://nchc.dl.sourceforge.net/project/vcftools/vcftools_0.1.13.tar.gz
1. pele' blog
2. vcftools使用
b. SOAPdenovo2
https://jaist.dl.sourceforge.net/project/soapdenovo2/SOAPdenovo2/src/r240/SOAPdenovo2-src-r240.tgz
注意在以下文件加入文本：
仔细查看编译输出，发现有如下几个错误提示：
multi_threads.cpp:93:14: error: ‘usleep’ was not declared in this scope
build_preArc.cpp:1071:39: error: ‘usleep’ was not declared in this scope
pregraph_sparse.cpp:171:42: error: ‘usleep’ was not declared in this scope
pregraph_sparse.cpp:504:2: error: ‘optind’ was not declared in this scope
pregraph_sparse.cpp:507:64: error: ‘getopt’ was not declared in this scope
于是找到这些源码，在头文件中加入：
#include “unistd.h“
c. jellyfish
https://github.com/gmarcais/Jellyfish/releases
Installation
./configure --prefix=$HOME
make -j 4
make install
d. SOAPec v2.01
里面有Kmer_Freq_AR
