基质细胞的注释

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成纤维细胞:

The first CAF sub-cluster was comprised of 280 cells (16.2% of all stromal; red cluster) and was classified as myofibroblast-like CAFs (myCAFs) through the elevated expression of activated fibroblast markers (ACTA2, FAP and PDPN) and collagen-related genes (COL1A1 and COL1A2);

Fibroblast 注释成两类:周皮细胞,平滑肌细胞和成纤维细胞
myofibroblast-like CAFs : ACTA2, FAP, PDPN;
inflammatory-CAFs (iCAFs):CXCL12;
differentiated-PVL(dPVAL): TAGLN, MYH11,MYLK;
immature-PVL (imPVL): PDGFRB, CD36, RGS5;

内皮细胞:

endothelial cells provide nutrients for tumour growth, constitute routes for metastatic dissemination through angiogenesis, and contribute to resistance to ‘chemotherapies and radiation’.

内皮细胞:(PECAM1,VWF, ENG)We identified five subtypes of endothelial cells (EC) including lymphatic, venous, and arterial endothelial cells (LEC, VECs, and AECs), tip cells, and an EC cluster enriched with interferon induced genes

淋巴内皮细胞(LEC):PDPN, PROX1;
静脉内皮细胞(VEC): ACKR1;
动脉内皮细胞(AEC): GJA5;
顶端细胞(tip cell):KCNE3,ESM1,ANGPT2,APLN;
干扰素EC细胞:干扰素相关基因。

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