文章
标题:Identification of mobile genetic elements with geNomad
期刊: Nat Biotechnol
时间:2023
github: https://github.com/apcamargo/genomad/
安装
conda create -n genomad
conda activate genomad
conda install genomad -c conda-forge -c bioconda genomad
# 数据库
genomad download-database .
[14:30:45] Requesting
https://portal.nersc.gov/genomad/__data__/genomad_db_v1.6.tar.gz.
[15:11:30] Finished downloading genomad_db_v1.6.tar.gz.
[15:11:45] Database extracted to genomad_db.
[15:11:45] Deleted genomad_db_v1.6.tar.gz.
[15:11:45] geNomad database (v1.6) is ready to be used!